nf-core/bacass: v1.1.1 nf-core/bacass: "Green Aluminium Shark" 2020/11/05

This is basically a maintenance update that includes template updates, fixed environments and some minor bugfixes. Merged in nf-core/tools template v 1.11 Updated multiple dependencies: fastqc=0.11.8, 0.11.9 multiqc=1.8, 1.9 kraken2=2.0.8_beta, 2.0.9beta prokka=1.14.5, 1.14.6 nanopolish=0.11.2, 0.13.2 parallel=20191122, 20200922 racon=1.4.10, 1.4.13 canu=1.9, 2.0 samtools=1.9, 1.11 nanoplot=1.28.1, 1.32.1 pycoqc=2.5.0.3, 2.5.0.23 Switched out containers for many tools to make DSLv2 transition easier (escape from dependency hell